PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940229.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 238aa    MW: 27300.8 Da    PI: 4.8451
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940229.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.33.6e-5461331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeelv++yLk+k++g k+el ++i+ev++yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+
  XP_010940229.1   6 LPPGFRFHPTDEELVNYYLKRKIHGLKIEL-DIIPEVELYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVC 99 
                     79****************************.99**************84335556888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++++g+kktLv+ykgrap+g +tdWvmheyrl
  XP_010940229.1 100 H-QNRAIGMKKTLVYYKGRAPQGIRTDWVMHEYRL 133
                     *.8999***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-634157IPR003441NAC domain
PROSITE profilePS5100558.7026156IPR003441NAC domain
PfamPF023658.1E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV NYYLKRKIHG LKIELDIIPE VELYKCEPWE LAEKSFLPSR  60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVCH QNRAIGMKKT LVYYKGRAPQ  120
GIRTDWVMHE YRLDDKECED TMGIQDSYAL CRVFKKNVVC TEVEEQGQCS LALVEGSQGA  180
LAEYETMSPD VPVGSSCCLD EDEKDDTWMQ FIADDAWCIN VSSNEGGQDP SCVAIANL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-54215611168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940229.10.0PREDICTED: NAC domain-containing protein 45-like
SwissprotA4VCM03e-90NAC45_ARATH; NAC domain-containing protein 45
TrEMBLM0SEF51e-158M0SEF5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P13880_0011e-157(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37133879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-127NAC domain containing protein 57